Package: fitode 0.1.1.9000
fitode: Tools for Ordinary Differential Equations Model Fitting
Methods and functions for fitting ordinary differential equations (ODE) model in 'R'. Sensitivity equations are used to compute the gradients of ODE trajectories with respect to underlying parameters, which in turn allows for more stable fitting. Other fitting methods, such as MCMC (Markov chain Monte Carlo), are also available.
Authors:
fitode_0.1.1.9000.tar.gz
fitode_0.1.1.9000.zip(r-4.5)fitode_0.1.1.9000.zip(r-4.4)fitode_0.1.1.9000.zip(r-4.3)
fitode_0.1.1.9000.tgz(r-4.4-any)fitode_0.1.1.9000.tgz(r-4.3-any)
fitode_0.1.1.9000.tar.gz(r-4.5-noble)fitode_0.1.1.9000.tar.gz(r-4.4-noble)
fitode_0.1.1.9000.tgz(r-4.4-emscripten)fitode_0.1.1.9000.tgz(r-4.3-emscripten)
fitode.pdf |fitode.html✨
fitode/json (API)
# Install 'fitode' in R: |
install.packages('fitode', repos = c('https://parksw3.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/parksw3/fitode/issues
- SierraLeone2014 - Data from 2014 Sierra Leone Ebola epidemic
- blowfly - Nicholson's blowfly data
- bombay - Data from 1905 plague outbreak in Mumbai
- phila1918 - 1918 Philadelphia flu data set
- tumorgrowth - Tumor growth data
Last updated 1 days agofrom:fa26ea2ccf. Checks:ERROR: 1 WARNING: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | FAIL | Oct 30 2024 |
R-4.5-win | WARNING | Oct 30 2024 |
R-4.5-linux | WARNING | Oct 30 2024 |
R-4.4-win | WARNING | Oct 30 2024 |
R-4.4-mac | WARNING | Oct 30 2024 |
R-4.3-win | WARNING | Oct 30 2024 |
R-4.3-mac | WARNING | Oct 30 2024 |
Exports:coefconfintdfundfun2EvalfitodefitodeMCMCgradhessianinitializejacobianlogLikode.solveodemodelplotpredictprofileshowsimulatestdErsummaryTransformupdatevcov
Dependencies:bbmlebdsmatrixcodaDerivdeSolvelatticeMASSMatrixmvtnormnumDeriv